Its like this i put a pokemon in my fourth place in my roster but when i log out and log back in the fourth pokemon is removed and the fifth one is in fourth place. It happens everytime i log out.

go to your pokemon and click the remove pokemon 2-6 then log out of the game, log back in and replace all the pokemon to your roster

Well, the same problem happens to me, but it's my sixth pokemon slot instead. Except I kinda never log out except for pretty long spaces of time, so the problem doesn't really affect me. Also I just put the pokemon that switched out back through my box.

Thanx zappy now its working fine.

Edit: It worked at first but now its the same glitch again.